HLA Reporting Implementation Guide
0.0.1 - Draft

HLA Reporting Implementation Guide - Local Development build (v0.0.1). See the Directory of published versions

: HLA HGNC GeneID CodeSystem - XML Representation

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<CodeSystem xmlns="http://hl7.org/fhir">
  <id value="hla-genename-codesystem"/>
  <text>
    <status value="generated"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><h2>HLA HGNC GeneID CodeSystem</h2><div><p>CodeSystem of HLA gene group subset of HGNC GeneId Codesystem</p>
</div><p><b>Copyright Statement:</b> National Human Genome Research Institute (NHGRI)</p><p>This code system http://www.genenames.org/geneId defines many codes, of which the following are a subset:</p><table class="codes"><tr><td style="white-space:nowrap"><b>Code</b></td><td><b>Display</b></td><td><b>Definition</b></td></tr><tr><td style="white-space:nowrap">HGNC:4931<a name="hla-genename-codesystem-HGNC.584931"> </a></td><td>HLA-A</td><td>major histocompatibility complex, class I, A</td></tr><tr><td style="white-space:nowrap">HGNC:4932<a name="hla-genename-codesystem-HGNC.584932"> </a></td><td>HLA-B</td><td>major histocompatibility complex, class I, B</td></tr><tr><td style="white-space:nowrap">HGNC:4933<a name="hla-genename-codesystem-HGNC.584933"> </a></td><td>HLA-C</td><td>major histocompatibility complex, class I, C</td></tr><tr><td style="white-space:nowrap">HGNC:4934<a name="hla-genename-codesystem-HGNC.584934"> </a></td><td>HLA-DMA</td><td>major histocompatibility complex, class II, DM alpha</td></tr><tr><td style="white-space:nowrap">HGNC:4935<a name="hla-genename-codesystem-HGNC.584935"> </a></td><td>HLA-DMB</td><td>major histocompatibility complex, class II, DM beta</td></tr><tr><td style="white-space:nowrap">HGNC:4936<a name="hla-genename-codesystem-HGNC.584936"> </a></td><td>HLA-DOA</td><td>major histocompatibility complex, class II, DO alpha</td></tr><tr><td style="white-space:nowrap">HGNC:4937<a name="hla-genename-codesystem-HGNC.584937"> </a></td><td>HLA-DOB</td><td>major histocompatibility complex, class II, DO beta</td></tr><tr><td style="white-space:nowrap">HGNC:4938<a name="hla-genename-codesystem-HGNC.584938"> </a></td><td>HLA-DPA1</td><td>major histocompatibility complex, class II, DP alpha 1</td></tr><tr><td style="white-space:nowrap">HGNC:4939<a name="hla-genename-codesystem-HGNC.584939"> </a></td><td>HLA-DPA2</td><td>major histocompatibility complex, class II, DP alpha 2 (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:19393<a name="hla-genename-codesystem-HGNC.5819393"> </a></td><td>HLA-DPA3</td><td>major histocompatibility complex, class II, DP alpha 3 (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:4940<a name="hla-genename-codesystem-HGNC.584940"> </a></td><td>HLA-DPB1</td><td>major histocompatibility complex, class II, DP beta 1</td></tr><tr><td style="white-space:nowrap">HGNC:4941<a name="hla-genename-codesystem-HGNC.584941"> </a></td><td>HLA-DPB2</td><td>major histocompatibility complex, class II, DP beta 2 (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:4942<a name="hla-genename-codesystem-HGNC.584942"> </a></td><td>HLA-DQA1</td><td>major histocompatibility complex, class II, DQ alpha 1</td></tr><tr><td style="white-space:nowrap">HGNC:4943<a name="hla-genename-codesystem-HGNC.584943"> </a></td><td>HLA-DQA2</td><td>major histocompatibility complex, class II, DQ alpha 2</td></tr><tr><td style="white-space:nowrap">HGNC:4944<a name="hla-genename-codesystem-HGNC.584944"> </a></td><td>HLA-DQB1</td><td>major histocompatibility complex, class II, DQ beta 1</td></tr><tr><td style="white-space:nowrap">HGNC:4945<a name="hla-genename-codesystem-HGNC.584945"> </a></td><td>HLA-DQB2</td><td>major histocompatibility complex, class II, DQ beta 2</td></tr><tr><td style="white-space:nowrap">HGNC:4946<a name="hla-genename-codesystem-HGNC.584946"> </a></td><td>HLA-DQB3</td><td>major histocompatibility complex, class II, DQ beta 3</td></tr><tr><td style="white-space:nowrap">HGNC:4947<a name="hla-genename-codesystem-HGNC.584947"> </a></td><td>HLA-DRA</td><td>major histocompatibility complex, class II, DR alpha</td></tr><tr><td style="white-space:nowrap">HGNC:4948<a name="hla-genename-codesystem-HGNC.584948"> </a></td><td>HLA-DRB1</td><td>major histocompatibility complex, class II, DR beta 1</td></tr><tr><td style="white-space:nowrap">HGNC:4950<a name="hla-genename-codesystem-HGNC.584950"> </a></td><td>HLA-DRB2</td><td>major histocompatibility complex, class II, DR beta 2 (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:4951<a name="hla-genename-codesystem-HGNC.584951"> </a></td><td>HLA-DRB3</td><td>major histocompatibility complex, class II, DR beta 3</td></tr><tr><td style="white-space:nowrap">HGNC:4952<a name="hla-genename-codesystem-HGNC.584952"> </a></td><td>HLA-DRB4</td><td>major histocompatibility complex, class II, DR beta 4</td></tr><tr><td style="white-space:nowrap">HGNC:4953<a name="hla-genename-codesystem-HGNC.584953"> </a></td><td>HLA-DRB5</td><td>major histocompatibility complex, class II, DR beta 5</td></tr><tr><td style="white-space:nowrap">HGNC:4954<a name="hla-genename-codesystem-HGNC.584954"> </a></td><td>HLA-DRB6</td><td>major histocompatibility complex, class II, DR beta 6 (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:4955<a name="hla-genename-codesystem-HGNC.584955"> </a></td><td>HLA-DRB7</td><td>major histocompatibility complex, class II, DR beta 7 (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:4956<a name="hla-genename-codesystem-HGNC.584956"> </a></td><td>HLA-DRB8</td><td>major histocompatibility complex, class II, DR beta 8 (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:4957<a name="hla-genename-codesystem-HGNC.584957"> </a></td><td>HLA-DRB9</td><td>major histocompatibility complex, class II, DR beta 9 (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:4962<a name="hla-genename-codesystem-HGNC.584962"> </a></td><td>HLA-E</td><td>major histocompatibility complex, class I, E</td></tr><tr><td style="white-space:nowrap">HGNC:4963<a name="hla-genename-codesystem-HGNC.584963"> </a></td><td>HLA-F</td><td>major histocompatibility complex, class I, F</td></tr><tr><td style="white-space:nowrap">HGNC:4964<a name="hla-genename-codesystem-HGNC.584964"> </a></td><td>HLA-G</td><td>major histocompatibility complex, class I, G</td></tr><tr><td style="white-space:nowrap">HGNC:4965<a name="hla-genename-codesystem-HGNC.584965"> </a></td><td>HLA-H</td><td>major histocompatibility complex, class I, H (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:4967<a name="hla-genename-codesystem-HGNC.584967"> </a></td><td>HLA-J</td><td>major histocompatibility complex, class I, J (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:4969<a name="hla-genename-codesystem-HGNC.584969"> </a></td><td>HLA-K</td><td>major histocompatibility complex, class I, K (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:4970<a name="hla-genename-codesystem-HGNC.584970"> </a></td><td>HLA-L</td><td>major histocompatibility complex, class I, L (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:19406<a name="hla-genename-codesystem-HGNC.5819406"> </a></td><td>HLA-N</td><td>major histocompatibility complex, class I, N (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:21196<a name="hla-genename-codesystem-HGNC.5821196"> </a></td><td>HLA-P</td><td>major histocompatibility complex, class I, P (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:19395<a name="hla-genename-codesystem-HGNC.5819395"> </a></td><td>HLA-S</td><td>major histocompatibility complex, class I, S (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:23478<a name="hla-genename-codesystem-HGNC.5823478"> </a></td><td>HLA-T</td><td>major histocompatibility complex, class I, T (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:23477<a name="hla-genename-codesystem-HGNC.5823477"> </a></td><td>HLA-U</td><td>major histocompatibility complex, class I, U (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:23482<a name="hla-genename-codesystem-HGNC.5823482"> </a></td><td>HLA-V</td><td>major histocompatibility complex, class I, V (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:23425<a name="hla-genename-codesystem-HGNC.5823425"> </a></td><td>HLA-W</td><td>major histocompatibility complex, class I, W (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:19385<a name="hla-genename-codesystem-HGNC.5819385"> </a></td><td>HLA-X</td><td>major histocompatibility complex, class I, X (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:33913<a name="hla-genename-codesystem-HGNC.5833913"> </a></td><td>HLA-Y</td><td>major histocompatibility complex, class I, Y (pseudogene)</td></tr><tr><td style="white-space:nowrap">HGNC:19394<a name="hla-genename-codesystem-HGNC.5819394"> </a></td><td>HLA-Z</td><td>major histocompatibility complex, class I, Z (pseudogene)</td></tr></table></div>
  </text>
  <url value="http://www.genenames.org/geneId"/>
  <version value="0.0.1"/>
  <name value="HLAGeneIdCS"/>
  <title value="HLA HGNC GeneID CodeSystem"/>
  <status value="active"/>
  <experimental value="false"/>
  <date value="2020-06-01T16:44:42-05:00"/>
  <publisher value="NMDP/Be The Match"/>
  <contact>
    <name value="Bob Milius"/>
    <telecom>
      <system value="email"/>
      <value value="mailto:bmilius@nmdp.org"/>
    </telecom>
  </contact>
  <description
               value="CodeSystem of HLA gene group subset of HGNC GeneId Codesystem"/>
  <copyright value="National Human Genome Research Institute (NHGRI)"/>
  <content value="fragment"/>
  <concept>
    <code value="HGNC:4931"/>
    <display value="HLA-A"/>
    <definition value="major histocompatibility complex, class I, A"/>
  </concept>
  <concept>
    <code value="HGNC:4932"/>
    <display value="HLA-B"/>
    <definition value="major histocompatibility complex, class I, B"/>
  </concept>
  <concept>
    <code value="HGNC:4933"/>
    <display value="HLA-C"/>
    <definition value="major histocompatibility complex, class I, C"/>
  </concept>
  <concept>
    <code value="HGNC:4934"/>
    <display value="HLA-DMA"/>
    <definition value="major histocompatibility complex, class II, DM alpha"/>
  </concept>
  <concept>
    <code value="HGNC:4935"/>
    <display value="HLA-DMB"/>
    <definition value="major histocompatibility complex, class II, DM beta"/>
  </concept>
  <concept>
    <code value="HGNC:4936"/>
    <display value="HLA-DOA"/>
    <definition value="major histocompatibility complex, class II, DO alpha"/>
  </concept>
  <concept>
    <code value="HGNC:4937"/>
    <display value="HLA-DOB"/>
    <definition value="major histocompatibility complex, class II, DO beta"/>
  </concept>
  <concept>
    <code value="HGNC:4938"/>
    <display value="HLA-DPA1"/>
    <definition value="major histocompatibility complex, class II, DP alpha 1"/>
  </concept>
  <concept>
    <code value="HGNC:4939"/>
    <display value="HLA-DPA2"/>
    <definition
                value="major histocompatibility complex, class II, DP alpha 2 (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:19393"/>
    <display value="HLA-DPA3"/>
    <definition
                value="major histocompatibility complex, class II, DP alpha 3 (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:4940"/>
    <display value="HLA-DPB1"/>
    <definition value="major histocompatibility complex, class II, DP beta 1"/>
  </concept>
  <concept>
    <code value="HGNC:4941"/>
    <display value="HLA-DPB2"/>
    <definition
                value="major histocompatibility complex, class II, DP beta 2 (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:4942"/>
    <display value="HLA-DQA1"/>
    <definition value="major histocompatibility complex, class II, DQ alpha 1"/>
  </concept>
  <concept>
    <code value="HGNC:4943"/>
    <display value="HLA-DQA2"/>
    <definition value="major histocompatibility complex, class II, DQ alpha 2"/>
  </concept>
  <concept>
    <code value="HGNC:4944"/>
    <display value="HLA-DQB1"/>
    <definition value="major histocompatibility complex, class II, DQ beta 1"/>
  </concept>
  <concept>
    <code value="HGNC:4945"/>
    <display value="HLA-DQB2"/>
    <definition value="major histocompatibility complex, class II, DQ beta 2"/>
  </concept>
  <concept>
    <code value="HGNC:4946"/>
    <display value="HLA-DQB3"/>
    <definition value="major histocompatibility complex, class II, DQ beta 3"/>
  </concept>
  <concept>
    <code value="HGNC:4947"/>
    <display value="HLA-DRA"/>
    <definition value="major histocompatibility complex, class II, DR alpha"/>
  </concept>
  <concept>
    <code value="HGNC:4948"/>
    <display value="HLA-DRB1"/>
    <definition value="major histocompatibility complex, class II, DR beta 1"/>
  </concept>
  <concept>
    <code value="HGNC:4950"/>
    <display value="HLA-DRB2"/>
    <definition
                value="major histocompatibility complex, class II, DR beta 2 (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:4951"/>
    <display value="HLA-DRB3"/>
    <definition value="major histocompatibility complex, class II, DR beta 3"/>
  </concept>
  <concept>
    <code value="HGNC:4952"/>
    <display value="HLA-DRB4"/>
    <definition value="major histocompatibility complex, class II, DR beta 4"/>
  </concept>
  <concept>
    <code value="HGNC:4953"/>
    <display value="HLA-DRB5"/>
    <definition value="major histocompatibility complex, class II, DR beta 5"/>
  </concept>
  <concept>
    <code value="HGNC:4954"/>
    <display value="HLA-DRB6"/>
    <definition
                value="major histocompatibility complex, class II, DR beta 6 (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:4955"/>
    <display value="HLA-DRB7"/>
    <definition
                value="major histocompatibility complex, class II, DR beta 7 (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:4956"/>
    <display value="HLA-DRB8"/>
    <definition
                value="major histocompatibility complex, class II, DR beta 8 (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:4957"/>
    <display value="HLA-DRB9"/>
    <definition
                value="major histocompatibility complex, class II, DR beta 9 (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:4962"/>
    <display value="HLA-E"/>
    <definition value="major histocompatibility complex, class I, E"/>
  </concept>
  <concept>
    <code value="HGNC:4963"/>
    <display value="HLA-F"/>
    <definition value="major histocompatibility complex, class I, F"/>
  </concept>
  <concept>
    <code value="HGNC:4964"/>
    <display value="HLA-G"/>
    <definition value="major histocompatibility complex, class I, G"/>
  </concept>
  <concept>
    <code value="HGNC:4965"/>
    <display value="HLA-H"/>
    <definition
                value="major histocompatibility complex, class I, H (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:4967"/>
    <display value="HLA-J"/>
    <definition
                value="major histocompatibility complex, class I, J (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:4969"/>
    <display value="HLA-K"/>
    <definition
                value="major histocompatibility complex, class I, K (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:4970"/>
    <display value="HLA-L"/>
    <definition
                value="major histocompatibility complex, class I, L (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:19406"/>
    <display value="HLA-N"/>
    <definition
                value="major histocompatibility complex, class I, N (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:21196"/>
    <display value="HLA-P"/>
    <definition
                value="major histocompatibility complex, class I, P (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:19395"/>
    <display value="HLA-S"/>
    <definition
                value="major histocompatibility complex, class I, S (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:23478"/>
    <display value="HLA-T"/>
    <definition
                value="major histocompatibility complex, class I, T (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:23477"/>
    <display value="HLA-U"/>
    <definition
                value="major histocompatibility complex, class I, U (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:23482"/>
    <display value="HLA-V"/>
    <definition
                value="major histocompatibility complex, class I, V (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:23425"/>
    <display value="HLA-W"/>
    <definition
                value="major histocompatibility complex, class I, W (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:19385"/>
    <display value="HLA-X"/>
    <definition
                value="major histocompatibility complex, class I, X (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:33913"/>
    <display value="HLA-Y"/>
    <definition
                value="major histocompatibility complex, class I, Y (pseudogene)"/>
  </concept>
  <concept>
    <code value="HGNC:19394"/>
    <display value="HLA-Z"/>
    <definition
                value="major histocompatibility complex, class I, Z (pseudogene)"/>
  </concept>
</CodeSystem>